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适用平台Windows
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ChromasPro具体功能
打开Applied Biosystems .ab1, Staden Chromatogram (SCF and ZTR), 454 SFF, FASTA, FASTQ, EMBL, GenBank, SwissProt, GenPept, GCG RSF和纯文本格式中的序列。
以.ab1, .scf, .fasta 和.fastq格式保存序列。
使用图形界面组装重叠序列,生成一致性并**模糊性进行编辑。
使用高质量数据自动去除低质量序列以改进序列组装。
ChromasPro is suitable for DNA sequence assembly projects up to a few megabases, and basic sequence editing and analysis. It is able to assemble data from Sanger sequencers such as ABI, and 454 and Illumina next-generation sequencers, with up to 1,000,000 sequences if 8 Gb RAM is available. ChromasPro has the following features:
Fixed aligned chromatogram base numbering bug which sometimes ignored gaps in the number calculation.
Vectors used in trimming project sequences are now saved in the project file.
Clipboard copy now works on aligned sequences.
Added FASTQ format copy option.
Added trim low quality option on opening of sequence files.
Added ‘Open Project’ menu item with it’s own most recent folder.
Graphics (restriction maps, graphs, etc.) can now be saved.
Files containing multiple sequences now open in a project by default.
The restriction map options box can be recalled if closed with a map still open.
Ctrl+mou*heel now zooms the chromatogram Y-axis.
ChromasPro DNA序列分析软件
ChromasPro适用于DNA序列组装项目,可达到几兆字节,并进行基本序列编辑和分析。它能够从Sanger序列器,比如ABI,454和Illumina下一代序列器中组装数据,如果有8GB的可用内存,则多可组装1,000,000个序列。
打印色谱图,限制位点和片段图,和开放阅读框架图。
通过NCBI进行核苷酸和蛋白质BLAST搜索。
与ClustalW接口执行多个对齐。
反向互补序列和色谱图。
Open sequences in Applied Biosystems .ab1, Staden Chromatogram (SCF and ZTR), 454 SFF, FASTA, FASTQ, EMBL, GenBank, SwissProt, GenPept, GCG RSF and plain text formats.
Save sequences in .ab1, .scf, .fasta and .fastq formats.
ChromasPro DNA序列分析软件
ChromasPro适用于DNA序列组装项目,可达到几兆字节,并进行基本序列编辑和分析。它能够从Sanger序列器,比如ABI,454和Illumina下一代序列器中组装数据,如果有8GB的可用内存,则多可组装1,000,000个序列。
通过匹配或优对齐搜索序列。
编辑核苷酸序列时显示翻译。
进行反向翻译并绘制核苷酸简并。
绘制蛋白质的亲水性和抗原性。
复制色谱切片的图像,粘贴到文档或演示文稿中。
系统需求
Chromas is a free, simple, easy-to-use viewer and editor for chromatograms (traces) from automated Sanger sequencers. It has many format conversion options including batch processing functions to handle many files at once. As of version 2.6 it can use PeakTrace RP to enhance .ab1 files and extract more high-quality bases (this is a paid service). More…
ChromasPro is for assembly of sequence reads into contigs, with a graphical contig editor which displays aligned chromatograms. It also peforms general sequence analysis such as restriction enzyme mapping, open-reading-frame searches, and BLAST submission. More…
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