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NEXT-GENERATION DNA SEQUENCING (NGS)
Sequencher empowers the benchtop scientist by bringing the latest peer-reviewed NGS algorithms out of the command line and into an intuitive point and click interface. Whether performing reference-guided alignments, de novo assembly, variant calling, or SNP analyses, Sequencher has the tools you need to get results. Sequencher has integrated the comprehensive Cufflinks suite for in-depth transcript analysis and differential gene expression of your RNA-Seq data. Sequencher can easily generate unique visualizations of your RNA-Seq data with custom plots and charts giving you publication-ready graphics in seconds.
Visualize the results using the Variance Table and its powerful reports.
MUSCLE is a command line program, which means that normally you would be using this program through a Terminal application. Sequencher gives you access to MUSCLE’s power without the problems of learning to use the UNIX command line.
Finally, export the results in a variety of different formats such as MSF, Phylip, NEXUS and FastA for use in other programs or simply create a consensus and export it.
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